Por que no los dos? H. pylori needs to artificially buffer its micro-environment in order to survive. Anything which disrupts the production of stomach acid or digestive proteins could give it an edge.
Anecdata of 1, but I had a bout of bad chronic heartburn after eating at some sketchy food joint. I was popping omeprazole like crazy. Somehow in researching this, the topic of hydrogen forming bacteria came up. I somehow hypothesized that PPIs were actually exacerbating the problem, because the higher pH was allowing the bacteria to survive. I put myself on a high prebiotic/probiotic diet, stopped the PPIs and antacids, and it resolved completely by a few weeks later. I could easily see a similar thing happening with heliobacter.
Also the “medical-science” institution you are imagining with a collective self-esteem doesn’t exist in any cohesive way. You memorize, read, diagnose and treat.
And please don’t lump us in with phDs